Chauve, Cedric

A Methodological Framework for the Reconstruction of Contiguous Regions of Ancestral Genomes and Its Application to Mammalian Genomes

Algorithmic aspects of some vertex ordering problems

Algorithms for Finding Tucker Patterns

Alignment-free clustering and error correction of UMI tagged DNA molecules

Ancestral Gene Synteny Reconstruction Improves Extant Species Scaffolding

Consistency-Based Detection of Potential Tumor-Specific Deletions in Matched Normal/Tumor Genomes

Counting, Generating, Analyzing and Sampling Tree Alignments

Deconvoluting the Diversity of Within-host Pathogen Strains in a Multi-locus Sequence Typing Framework

Evolution of Genes Neighborhood Within Reconciled Phylogenies: An Ensemble Approach

Feature-based Comparison of Flow Cytometry Data