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Visualizing mutations of a virus sequence

Resource type
Thesis type
(Thesis) M.Sc.
Date created
2012-11-09
Authors/Contributors
Abstract
This thesis addresses a synthetic health-dataset, introduced at the IEEE VAST Challenge 2010. My research team participated in this contest to evaluate the pre-designed tool, ”IMAS” using a benchmark dataset.Learning from this contest, I designed an Information Visualization InfoVis prototype, ”FilooT” to gain a better understanding of that dataset. Following the Nested Model for Visualization Design, my thesis’ qualitative methodology consists of a design study and evaluation. To make an effective design, I followed well-cited InfoVis principles of perception and cognition. I also utilized prior knowledge produced by the proposed solutions that had been tackled the contest’s dataset. To understand the tool’s design capabilities for target domain analysts, I observed domain-users’ reactions to FilooT in a User-Experience scenario. The findings of the study indicated how analysts employ each of the visualization and interaction designs in their Bioinformatics’ task-analysis process. The critical analysis of the results inspired design informing suggestions.
Document
Identifier
etd7549
Copyright statement
Copyright is held by the author.
Permissions
The author granted permission for the file to be printed and for the text to be copied and pasted.
Scholarly level
Supervisor or Senior Supervisor
Thesis advisor: Shaw, Chris
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etd7549_MZeinalyBaraghoush.pdf 7.16 MB

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